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Port details
clustalx Multiple alignment of nucleic acid and protein sequences with GUI
2.1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port
Maintainer: jwb@FreeBSD.org search for ports maintained by this maintainer
Port Added: 21 May 2018 20:56:35
License: LGPL3
ClustalX is the graphical version of Clustal, a general purpose multiple
sequence alignment program for DNA or proteins. It produces biologically
meaningful multiple sequence alignments of divergent sequences. It calculates
the best match for the selected sequences, and lines them up so that the
identities, similarities and differences can be seen. Evolutionary
relationships can be seen via viewing Cladograms or Phylograms.

WWW: http://www.clustal.org/
SVNWeb : Homepage : PortsMon
    Pseudo-pkg-plist information, but much better, from make generate-plist
    Expand this list (8 items)
  1. bin/clustalx
  2. /usr/local/share/clustalx/colprot.xml
  3. /usr/local/share/clustalx/coldna.xml
  4. /usr/local/share/clustalx/colprint.xml
  5. /usr/local/share/clustalx/clustalx.hlp
  6. /usr/local/share/licenses/clustalx-2.1/catalog.mk
  7. /usr/local/share/licenses/clustalx-2.1/LICENSE
  8. /usr/local/share/licenses/clustalx-2.1/LGPL3
  9. Collapse this list.

To install the port: cd /usr/ports/biology/clustalx/ && make install clean
To add the package: pkg install clustalx

PKGNAME: clustalx

distinfo:

TIMESTAMP = 1526839706
SHA256 (clustalx-2.1.tar.gz) = e10adb728c320598a165ca529f1aa3d2560061de0236e0a0926eaca9554afa05
SIZE (clustalx-2.1.tar.gz) = 341649


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. moc : devel/qt4-moc
  2. qmake : devel/qt4-qmake
Runtime dependencies:
  1. moc : devel/qt4-moc
Library dependencies:
  1. libQtCore.so : devel/qt4-corelib
  2. libQtGui.so : x11-toolkits/qt4-gui
  3. libQtXml.so : textproc/qt4-xml
There are no ports dependent upon this port

Configuration Options
     No options to configure

USES:
qmake qmake:_env

Master Sites:
  1. ftp://ftp.ebi.ac.uk/pub/software/clustalw2/2.1/
  2. http://www.clustal.org/download/current/

Number of commits found: 1

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
21 May 2018 20:56:18
Original commit files touched by this commit  2.1
Revision:470575
jwb search for other commits by this committer
biology/clustalx: Multiple alignment of nucleic acid and protein sequences with
GUI

Approved by:    jrm
Differential Revision:  https://reviews.freebsd.org/D15505

Number of commits found: 1

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